Gene: Efna5 (ephrin A5) Rattus norvegicus
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Symbol: Efna5
Name: ephrin A5
Description: Exhibits ephrin receptor binding activity; involved in brain development; predicted to localize to several cellular components, including the GABA-ergic synapse, adherens junction, and anchored component of external side of plasma membrane; orthologous to human EFNA5 (ephrin A5); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; INTERACTS WITH 1-[(4-chlorophenyl)-phenylmethyl]-4-methylpiperazine; 1-naphthyl isothiocyanate; acrylamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: AL-1; eph-related receptor tyrosine kinase ligand 7; ephrin-A5; LERK-7; Lerk7
Orthologs:
Homo sapiens (human) : EFNA5 (ephrin A5)  HGNC  Alliance
Mus musculus (house mouse) : Efna5 (ephrin A5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Efna5 (ephrin A5)
Pan paniscus (bonobo/pygmy chimpanzee) : EFNA5 (ephrin A5)
Canis lupus familiaris (dog) : EFNA5 (ephrin A5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Efna5 (ephrin A5)
Sus scrofa (pig) : EFNA5 (ephrin A5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.09110,054,002 - 110,329,878 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.09109,624,143 - 109,898,215 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.49101,227,615 - 101,532,696 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.19101,437,094 - 101,742,176 (-)NCBI
Celera999,743,743 - 100,016,279 (-)NCBICelera
Cytogenetic Map9q37NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Efna5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620391
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.