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Gene: Ajuba (ajuba LIM protein) Rattus norvegicus
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Symbol: Ajuba
Name: ajuba LIM protein
Description: Predicted to have several functions, including actin filament binding activity; alpha-catenin binding activity; and transcription corepressor activity. Predicted to be involved in several processes, including calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules; regulation of gene expression; and regulation of intracellular signal transduction. Localizes to the cell-cell junction. Orthologous to human AJUBA (ajuba LIM protein); PARTICIPATES IN E-cadherin signaling pathway; INTERACTS WITH 1,3-dinitrobenzene; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: ajuba homolog; ajuba homolog (Xenopus laevis); Jub; jub, ajuba homolog; jub, ajuba homolog (Xenopus laevis); LIM domain-containing protein ajuba; MGC93830
Orthologs:
Homo sapiens (human) : AJUBA (ajuba LIM protein)  HGNC  Alliance
Mus musculus (house mouse) : Ajuba (ajuba LIM protein)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ajuba (ajuba LIM protein)
Pan paniscus (bonobo/pygmy chimpanzee) : AJUBA (ajuba LIM protein)
Canis lupus familiaris (dog) : AJUBA (ajuba LIM protein)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ajuba (ajuba LIM protein)
Sus scrofa (pig) : AJUBA (ajuba LIM protein)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01533,208,210 - 33,218,456 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1533,208,216 - 33,218,456 (-)Ensembl
Rnor_5.01537,092,299 - 37,103,304 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41532,627,633 - 32,637,861 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11532,644,597 - 32,652,711 (-)NCBI
Celera1527,595,895 - 27,610,669 (-)NCBICelera
Cytogenetic Map15p13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Ajuba
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620407
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.