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Gene: Vamp5 (vesicle-associated membrane protein 5) Rattus norvegicus
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Symbol: Vamp5
Name: vesicle-associated membrane protein 5
Description: Predicted to be involved in Golgi to plasma membrane protein transport and skeletal muscle tissue development. Localizes to the plasma membrane and trans-Golgi network. Orthologous to human VAMP5 (vesicle associated membrane protein 5); INTERACTS WITH (+)-schisandrin B; 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: myobrevin; VAMP-5
Orthologs:
Homo sapiens (human) : VAMP5 (vesicle associated membrane protein 5)  HGNC  Alliance
Mus musculus (house mouse) : Vamp5 (vesicle-associated membrane protein 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Vamp5 (vesicle associated membrane protein 5)
Pan paniscus (bonobo/pygmy chimpanzee) : VAMP5 (vesicle associated membrane protein 5)
Canis lupus familiaris (dog) : VAMP5 (vesicle associated membrane protein 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Vamp5 (vesicle associated membrane protein 5)
Sus scrofa (pig) : VAMP5 (vesicle associated membrane protein 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04100,231,561 - 100,232,560 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04165,002,320 - 165,003,319 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44105,673,889 - 105,674,892 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14105,918,369 - 105,919,371 (-)NCBI
Celera493,578,068 - 93,579,067 (-)NCBICelera
Cytogenetic Map4q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Vamp5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620419
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.