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Gene: Cdhr1 (cadherin-related family member 1) Rattus norvegicus
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Symbol: Cdhr1
Name: cadherin-related family member 1
Description: Predicted to have calcium ion binding activity. Predicted to be involved in cell adhesion; photoreceptor cell development; and photoreceptor cell maintenance. Predicted to localize to the integral component of plasma membrane and photoreceptor outer segment membrane. Human ortholog(s) of this gene implicated in cone-rod dystrophy 15. Orthologous to human CDHR1 (cadherin related family member 1); INTERACTS WITH 6-propyl-2-thiouracil; ammonium chloride; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: KIAA1775; MT-protocadherin; Pcdh21; photoreceptor cadherin; prCAD; protocadherin 21; protocadherin-21
Orthologs:
Homo sapiens (human) : CDHR1 (cadherin related family member 1)  HGNC  Alliance
Mus musculus (house mouse) : Cdhr1 (cadherin-related family member 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cdhr1 (cadherin related family member 1)
Pan paniscus (bonobo/pygmy chimpanzee) : CDHR1 (cadherin related family member 1)
Canis lupus familiaris (dog) : CDHR1 (cadherin related family member 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cdhr1 (cadherin related family member 1)
Sus scrofa (pig) : CDHR1 (cadherin related family member 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01614,328,161 - 14,348,049 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1614,328,160 - 14,348,046 (-)Ensembl
Rnor_5.01614,230,682 - 14,250,567 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41613,284,018 - 13,303,854 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11613,284,016 - 13,303,852 (-)NCBI
Celera1613,101,611 - 13,121,487 (-)NCBICelera
Cytogenetic Map16p14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Cdhr1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620420
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.