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Gene: Pdlim3 (PDZ and LIM domain 3) Rattus norvegicus
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Symbol: Pdlim3
Name: PDZ and LIM domain 3
Description: Exhibits actinin binding activity. Predicted to be involved in actin filament organization; heart development; and muscle structure development. Localizes to the Z disc. Orthologous to human PDLIM3 (PDZ and LIM domain 3); INTERACTS WITH 1,2-dimethylhydrazine; 17alpha-ethynylestradiol; 2,5-hexanedione.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: actinin alpha 2 associated LIM protein; actinin-associated LIM protein; Actn2lp; Alp; alpha-actinin-2-associated LIM protein; PDZ and LIM domain protein 3; SK-2
Orthologs:
Homo sapiens (human) : PDLIM3 (PDZ and LIM domain 3)  HGNC  Alliance
Mus musculus (house mouse) : Pdlim3 (PDZ and LIM domain 3)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pdlim3 (PDZ and LIM domain 3)
Pan paniscus (bonobo/pygmy chimpanzee) : PDLIM3 (PDZ and LIM domain 3)
Canis lupus familiaris (dog) : PDLIM3 (PDZ and LIM domain 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pdlim3 (PDZ and LIM domain 3)
Sus scrofa (pig) : PDLIM3 (PDZ and LIM domain 3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01649,543,140 - 49,574,362 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01649,271,210 - 49,303,161 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41649,637,068 - 49,668,802 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11649,637,142 - 49,668,877 (-)NCBI
Celera1644,350,214 - 44,381,388 (-)NCBICelera
Cytogenetic Map16q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Candidate Gene Status
Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Pdlim3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620427
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.