Gene: Xcl1 (X-C motif chemokine ligand 1) Rattus norvegicus
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Symbol: Xcl1
Name: X-C motif chemokine ligand 1
Description: Predicted to have CCR chemokine receptor binding activity, chemokine activity, and protein homodimerization activity; predicted to be involved in several processes, including cellular response to cytokine stimulus, positive regulation of immune effector process, and positive regulation of leukocyte migration; predicted to localize to the extracellular space; biomarker of anti-basement membrane glomerulonephritis; orthologous to several human genes including XCL1 (X-C motif chemokine ligand 1); PARTICIPATES IN chemokine mediated signaling pathway; INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 1,2,4-trimethylbenzene; 1,2-dimethylhydrazine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: c motif chemokine 1; chemokine (C motif) ligand 1; cytokine SCM-1; Ltn; lymphotactin; Scyc1; small inducible cytokine subfamily C, member 1 (lymphotactin); small-inducible cytokine C1
Orthologs:
Homo sapiens (human) : XCL1 (X-C motif chemokine ligand 1)  HGNC  Alliance
Mus musculus (house mouse) : Xcl1 (chemokine (C motif) ligand 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Xcl1 (X-C motif chemokine ligand 1)
Canis lupus familiaris (dog) : LOC490356 (cytokine SCM-1 beta)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : LOC101970885 (lymphotactin)
Sus scrofa (pig) : XCL1 (chemokine (C motif) ligand 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01383,199,402 - 83,202,845 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01388,079,753 - 88,083,196 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41380,691,195 - 80,694,638 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11380,705,382 - 80,708,826 (-)NCBI
Celera1376,965,267 - 76,968,710 (-)NCBICelera
Cytogenetic Map13q23NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Xcl1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620452
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.