Gene: Nphs2 (NPHS2 stomatin family member, podocin) Rattus norvegicus
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Symbol: Nphs2
Name: NPHS2 stomatin family member, podocin
Description: Predicted to be involved in actin cytoskeleton reorganization and metanephric glomerular visceral epithelial cell development; predicted to colocalize with the slit diaphragm; used to study membranous glomerulonephritis and proteinuria; biomarker of nephrotic syndrome; orthologous to human NPHS2 (NPHS2 stomatin family member, podocin); INTERACTS WITH 3'-amino-3'-deoxy-N(6),N(6)-dimethyladenosine; acrylamide; all-trans-retinoic acid.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: MGC112589; nephrosis 2 homolog (human); nephrosis 2 homolog, podocin; nephrosis 2 homolog, podocin (human); nephrosis 2 idiopathic steroid-resistant (podocin); nephrosis 2, idiopathic, steroid-resistant; nephrosis 2, idiopathic, steroid-resistant (podocin); NPHS2, podocin; podocin
Orthologs:
Homo sapiens (human) : NPHS2 (NPHS2 stomatin family member, podocin)  HGNC  Alliance
Mus musculus (house mouse) : Nphs2 (nephrosis 2, podocin)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Nphs2 (NPHS2 stomatin family member, podocin)
Canis lupus familiaris (dog) : NPHS2 (NPHS2 stomatin family member, podocin)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Nphs2 (NPHS2 stomatin family member, podocin)
Sus scrofa (pig) : NPHS2 (NPHS2 stomatin family member, podocin)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01373,929,136 - 73,941,522 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01378,853,114 - 78,865,500 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41371,296,482 - 71,308,868 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11371,310,669 - 71,323,056 (+)NCBI
Celera1368,309,838 - 68,322,218 (+)NCBICelera
Cytogenetic Map13q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Nphs2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620461
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.