Gene: Tcf21 (transcription factor 21) Rattus norvegicus
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Symbol: Tcf21
Name: transcription factor 21
Description: Predicted to have several functions, including DNA-binding transcription factor activity, DNA-binding transcription factor binding activity, and E-box binding activity; involved in Sertoli cell differentiation, embryonic digestive tract morphogenesis, and gland development; predicted to localize to the nucleus; orthologous to human TCF21 (transcription factor 21); INTERACTS WITH (RS)-amphetamine; 4-tert-Octylphenol; acrylamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Capsulin; MGC112908; Msf-1; Pod1
Orthologs:
Homo sapiens (human) : TCF21 (transcription factor 21)  HGNC  Alliance
Mus musculus (house mouse) : Tcf21 (transcription factor 21)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tcf21 (transcription factor 21)
Pan paniscus (bonobo/pygmy chimpanzee) : TCF21 (transcription factor 21)
Canis lupus familiaris (dog) : TCF21 (transcription factor 21)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tcf21 (transcription factor 21)
Sus scrofa (pig) : TCF21 (transcription factor 21)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0123,906,717 - 23,909,576 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0125,370,183 - 25,373,042 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4123,211,054 - 23,213,913 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1123,214,112 - 23,214,625 (+)NCBI
Celera121,429,543 - 21,432,402 (+)NCBICelera
Cytogenetic Map1p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tcf21
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620523
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.