Gene: Slc17a6 (solute carrier family 17 member 6) Rattus norvegicus
Analyze
Symbol: Slc17a6
Name: solute carrier family 17 member 6
Description: Exhibits L-glutamate transmembrane transporter activity; involved in hippocampus development, neural retina development, and neurotransmitter loading into synaptic vesicle; localizes to the cytoplasm, excitatory synapse, and pericellular basket; biomarker of transient cerebral ischemia; orthologous to human SLC17A6 (solute carrier family 17 member 6); PARTICIPATES IN glutamate signaling pathway; INTERACTS WITH (S)-nicotine; ammonium chloride; beta-naphthoflavone.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: differentation-associated Na-dependent inorganic phosphate cotransporter; differentiation-associated BNPI; differentiation-associated Na(+)-dependent inorganic phosphate cotransporter; Dnpi; solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6; solute carrier family 17 (vesicular glutamate transporter), member 6; vesicular glutamate transporter 2; VGLUT2
Orthologs:
Homo sapiens (human) : SLC17A6 (solute carrier family 17 member 6)  HGNC  Alliance
Mus musculus (house mouse) : Slc17a6 (solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Slc17a6 (solute carrier family 17 member 6)
Pan paniscus (bonobo/pygmy chimpanzee) : SLC17A6 (solute carrier family 17 member 6)
Canis lupus familiaris (dog) : SLC17A6 (solute carrier family 17 member 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Slc17a6 (solute carrier family 17 member 6)
Sus scrofa (pig) : SLC17A6 (solute carrier family 17 member 6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01106,980,463 - 107,038,717 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01108,040,511 - 108,080,524 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41101,425,975 - 101,466,023 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11101,504,085 - 101,544,133 (+)NCBI
Celera195,386,910 - 95,426,949 (+)NCBICelera
Cytogenetic Map1q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Slc17a6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620531
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.