Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Pdyn (prodynorphin) Rattus norvegicus
Analyze
Symbol: Pdyn
Name: prodynorphin
Description: Predicted to have opioid receptor binding activity. Predicted to be involved in chemical synaptic transmission and neuropeptide signaling pathway. Localizes to the neuronal cell body; neuronal dense core vesicle lumen; and synaptic vesicle. Human ortholog(s) of this gene implicated in spinocerebellar ataxia type 23 and temporal lobe epilepsy. Orthologous to human PDYN (prodynorphin); INTERACTS WITH (R,R)-tramadol; (RS)-amphetamine; (S)-amphetamine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: beta-neoendorphin-dynorphin; preprodynorphin; proenkephalin B; proenkephalin-B
Orthologs:
Homo sapiens (human) : PDYN (prodynorphin)  HGNC  Alliance
Mus musculus (house mouse) : Pdyn (prodynorphin)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pdyn (prodynorphin)
Pan paniscus (bonobo/pygmy chimpanzee) : PDYN (prodynorphin)
Canis lupus familiaris (dog) : PDYN (prodynorphin)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pdyn (prodynorphin)
Sus scrofa (pig) : PDYN (prodynorphin)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03122,194,327 - 122,206,671 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3122,194,329 - 122,206,671 (-)Ensembl
Rnor_5.03127,809,688 - 127,822,296 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43117,291,025 - 117,303,367 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13117,196,597 - 117,208,923 (-)NCBI
Celera3115,716,443 - 115,728,785 (-)NCBICelera
Cytogenetic Map3q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Pdyn
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 62054
Created: 2001-04-11
Species: Rattus norvegicus
Last Modified: 2019-10-22
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.