Gene: Pacs1 (phosphofurin acidic cluster sorting protein 1) Rattus norvegicus
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Symbol: Pacs1
Name: phosphofurin acidic cluster sorting protein 1
Description: Predicted to have ion channel binding activity; involved in cellular protein localization and positive regulation of protein binding activity; localizes to the perinuclear region of cytoplasm; orthologous to human PACS1 (phosphofurin acidic cluster sorting protein 1); INTERACTS WITH 17alpha-ethynylestradiol; 2,2',4,4'-Tetrabromodiphenyl ether; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: cytosolic sorting protein PACS-1; Pacs-1
Orthologs:
Homo sapiens (human) : PACS1 (phosphofurin acidic cluster sorting protein 1)  HGNC  Alliance
Mus musculus (house mouse) : Pacs1 (phosphofurin acidic cluster sorting protein 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pacs1 (phosphofurin acidic cluster sorting protein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : PACS1 (phosphofurin acidic cluster sorting protein 1)
Canis lupus familiaris (dog) : PACS1 (phosphofurin acidic cluster sorting protein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pacs1 (phosphofurin acidic cluster sorting protein 1)
Sus scrofa (pig) : PACS1 (phosphofurin acidic cluster sorting protein 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01220,515,117 - 220,645,611 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01227,445,871 - 227,574,839 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41207,750,953 - 207,903,865 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11207,904,407 - 208,057,318 (-)NCBI
Celera1199,976,819 - 200,108,289 (-)NCBICelera
Cytogenetic Map1q43NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Pacs1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620579
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.