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Gene: Hoxa5 (homeo box A5) Rattus norvegicus
Symbol: Hoxa5
Name: homeo box A5
Description: ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); bronchiole development (ortholog); cartilage morphogenesis (ortholog); ASSOCIATED WITH Diaphragmatic Hernia (ortholog); head and neck squamous cell carcinoma (ortholog); Mouth Neoplasms (ortholog); FOUND IN nucleus (ortholog); INTERACTS WITH all-trans-retinoic acid; ammonium chloride; diethylstilbestrol
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: homeobox protein Hox-1.3; homeobox protein Hox-A5; homeobox protein Hox-A5-like; hox-1.3; LOC100909641; LOC100911546
Homo sapiens (human) : HOXA5 (homeobox A5)  HGNC  Alliance
Mus musculus (house mouse) : Hoxa5 (homeobox A5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Hoxa5 (homeobox A5)
Pan paniscus (bonobo/pygmy chimpanzee) : HOXA5 (homeobox A5)
Canis lupus familiaris (dog) : HOXA5 (homeobox A5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Hoxa5 (homeobox A5)
Sus scrofa (pig) : HOXA5 (homeobox A5)
Chlorocebus sabaeus (African green monkey) : HOXA5 (homeobox A5)
Heterocephalus glaber (naked mole-rat) : Hoxa5 (homeobox A5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_5.04146,837,214 - 146,841,619 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4480,501,675 - 80,504,626 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1480,779,823 - 80,781,740 (-)NCBI
Celera476,192,532 - 76,196,931 (-)NCBICelera
Cytogenetic Map4q24NCBI

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
miRNA Target Status



Nucleotide Sequences
Protein Sequences

Additional Information

External Database Links
Nomenclature History
More on Hoxa5
Alliance Gene
Ensembl Gene
JBrowse: rn5
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620609
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.