Gene: Vps33a (VPS33A core subunit of CORVET and HOPS complexes) Rattus norvegicus
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Symbol: Vps33a
Name: VPS33A core subunit of CORVET and HOPS complexes
Description: Predicted to be involved in several processes, including autophagosome maturation, endosome to lysosome transport, and lysosome localization; localizes to the cytoplasmic vesicle; predicted to colocalize with the AP-3 adaptor complex and clathrin complex; orthologous to human VPS33A (VPS33A core subunit of CORVET and HOPS complexes); INTERACTS WITH 2,6-dinitrotoluene; ammonium chloride; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: r-Vps33a; vacuolar protein sorting 33 homolog A; vacuolar protein sorting 33 homolog A (S. cerevisiae); vacuolar protein sorting 33A; vacuolar protein sorting 33A (yeast); vacuolar protein sorting protein 33a; vacuolar protein sorting-associated protein 33A; VPS33A CORVET/HOPS core subunit
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01238,459,816 - 38,482,903 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01240,340,915 - 40,364,786 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41234,163,538 - 34,189,019 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11234,026,939 - 34,054,016 (+)NCBI
Celera1234,710,002 - 34,735,096 (+)NCBICelera
Cytogenetic Map12q16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Vps33a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620643
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.