Gene: Vps33b (VPS33B, late endosome and lysosome associated) Rattus norvegicus
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Symbol: Vps33b
Name: VPS33B, late endosome and lysosome associated
Description: Predicted to be involved in several processes, including collagen fibril organization, collagen metabolic process, and endosome organization; localizes to the synaptic vesicle; predicted to colocalize with the AP-3 adaptor complex and clathrin complex; orthologous to human VPS33B (VPS33B late endosome and lysosome associated); INTERACTS WITH 1,2,4-trimethylbenzene; 2,4-dinitrotoluene; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: MGC93106; r-vps33b; vacuolar protein sorting 33 homolog B; vacuolar protein sorting 33 homolog B (yeast); vacuolar protein sorting 33B; vacuolar protein sorting 33B (yeast); vacuolar protein sorting homolog r-vps33b; vacuolar protein sorting-associated protein 33B
Orthologs:
Homo sapiens (human) : VPS33B (VPS33B late endosome and lysosome associated)  HGNC  Alliance
Mus musculus (house mouse) : Vps33b (vacuolar protein sorting 33B)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Vps33b (VPS33B late endosome and lysosome associated)
Pan paniscus (bonobo/pygmy chimpanzee) : VPS33B (VPS33B late endosome and lysosome associated)
Canis lupus familiaris (dog) : VPS33B (VPS33B late endosome and lysosome associated)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Vps33b (VPS33B late endosome and lysosome associated)
Sus scrofa (pig) : VPS33B (VPS33B late endosome and lysosome associated)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01142,060,955 - 142,083,955 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01143,013,798 - 143,036,707 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41136,085,931 - 136,109,421 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11136,164,336 - 136,187,825 (+)NCBI
Celera1126,284,000 - 126,307,119 (+)NCBICelera
Cytogenetic Map1q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Vps33b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620644
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.