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Gene: Sf1 (splicing factor 1) Rattus norvegicus
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Symbol: Sf1
Name: splicing factor 1
CRRD ID: 620645
Description: Predicted to have identical protein binding activity and mRNA binding activity. Involved in negative regulation of smooth muscle cell proliferation. Predicted to localize to nuclear body and spliceosomal complex. Used to study ischemia. Orthologous to human SF1 (splicing factor 1); PARTICIPATES IN spliceosome pathway; INTERACTS WITH (+)-schisandrin B; 1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane; 17alpha-ethynylestradiol.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: Zfp162; zinc finger protein 162
Orthologs:
Homo sapiens (human) : SF1 (splicing factor 1)  HGNC  Alliance
Mus musculus (house mouse) : Sf1 (splicing factor 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sf1 (splicing factor 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SF1 (splicing factor 1)
Canis lupus familiaris (dog) : SF1 (splicing factor 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sf1 (splicing factor 1)
Sus scrofa (pig) : SF1 (splicing factor 1)
Chlorocebus sabaeus (African green monkey) : SF1 (splicing factor 1)
Heterocephalus glaber (naked mole-rat) : Sf1 (splicing factor 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01221,735,512 - 221,749,216 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1221,735,517 - 221,749,086 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01228,723,282 - 228,737,009 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41209,146,177 - 209,159,459 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11209,312,189 - 209,313,441 (+)NCBI
Celera1201,203,443 - 201,216,725 (+)NCBICelera
Cytogenetic Map1q43NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Sf1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620645
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2020-09-29
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.