Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Fat2 (FAT atypical cadherin 2) Rattus norvegicus
Analyze
Symbol: Fat2
Name: FAT atypical cadherin 2
Description: Predicted to have calcium ion binding activity. Involved in homophilic cell adhesion via plasma membrane adhesion molecules. Predicted to localize to the cell-cell adherens junction. Human ortholog(s) of this gene implicated in spinocerebellar ataxia 45. Orthologous to human FAT2 (FAT atypical cadherin 2); INTERACTS WITH acrylamide; ammonium chloride; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: FAT tumor suppressor homolog 2; FAT tumor suppressor homolog 2 (Drosophila); Fath2; Megf1; multiple EGF-like domains protein 1; multiple epidermal growth factor-like domains 1; multiple epidermal growth factor-like domains protein 1; protocadherin Fat 2
Orthologs:
Homo sapiens (human) : FAT2 (FAT atypical cadherin 2)  HGNC  Alliance
Mus musculus (house mouse) : Fat2 (FAT atypical cadherin 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Fat2 (FAT atypical cadherin 2)
Pan paniscus (bonobo/pygmy chimpanzee) : FAT2 (FAT atypical cadherin 2)
Canis lupus familiaris (dog) : FAT2 (FAT atypical cadherin 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Fat2 (FAT atypical cadherin 2)
Sus scrofa (pig) : FAT2 (FAT atypical cadherin 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01040,583,025 - 40,682,598 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01040,421,638 - 40,513,778 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41040,648,951 - 40,749,409 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11040,662,573 - 40,763,032 (-)NCBI
Celera1038,701,431 - 38,790,574 (-)NCBICelera
Cytogenetic Map10q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Fat2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620656
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.