Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Synrg (synergin, gamma) Rattus norvegicus
Analyze
Symbol: Synrg
Name: synergin, gamma
Description: Predicted to be involved in endocytosis and protein transport. Localizes to the clathrin coat of trans-Golgi network vesicle. Orthologous to human SYNRG (synergin gamma); INTERACTS WITH 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: AP1 gamma subunit binding protein 1; AP1 subunit gamma-binding protein 1; Ap1gbp1; gamma-synergin; synergin gamma; Syng
Orthologs:
Homo sapiens (human) : SYNRG (synergin gamma)  HGNC  Alliance
Mus musculus (house mouse) : Synrg (synergin, gamma)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Synrg (synergin gamma)
Pan paniscus (bonobo/pygmy chimpanzee) : SYNRG (synergin gamma)
Canis lupus familiaris (dog) : SYNRG (synergin gamma)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Synrg (synergin gamma)
Sus scrofa (pig) : SYNRG (synergin gamma)
Chlorocebus sabaeus (African green monkey) : SYNRG (synergin gamma)
Heterocephalus glaber (naked mole-rat) : Synrg (synergin gamma)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01071,278,698 - 71,357,791 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01071,230,888 - 71,271,499 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01070,890,012 - 70,927,522 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41072,247,720 - 72,330,036 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11072,262,041 - 72,309,447 (+)NCBI
Celera1067,788,307 - 67,860,055 (+)NCBICelera
Cytogenetic Map10q26NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression


Sequence

Nucleotide Sequences
Protein Sequences
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Synrg
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620684
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.