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Gene: Smu1 (SMU1, DNA replication regulator and spliceosomal factor) Rattus norvegicus
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Symbol: Smu1
Name: SMU1, DNA replication regulator and spliceosomal factor
Description: Predicted to be involved in mRNA splicing, via spliceosome and regulation of alternative mRNA splicing, via spliceosome. Predicted to localize to the U2-type precatalytic spliceosome and nuclear speck. Orthologous to human SMU1 (SMU1 DNA replication regulator and spliceosomal factor); INTERACTS WITH 2,4-dinitrotoluene; 2,6-dinitrotoluene; ammonium chloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: brain-enriched WD repeat-containing protein; brain-enriched WD-repeat protein; Bwd; DNA replication regulator and spliceosomal factor; homolog of C. elegans smu-1; Smu-1; smu-1 suppressor of mec-8 and unc-52 homolog; smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans); smu-1 suppressor of mec-8 and unc-52 protein homolog; suppressor of Mec and Unc defects 1 homolog; suppressor of Mec and Unc defects 1 homolog (C. elegans); WD40 repeat-containing protein SMU1
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0557,042,301 - 57,061,379 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl557,042,705 - 57,061,365 (-)Ensembl
Rnor_5.0561,576,122 - 61,595,202 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4558,115,070 - 58,133,640 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1558,115,248 - 58,133,819 (-)NCBI
Celera554,468,882 - 54,487,453 (-)NCBICelera
Cytogenetic Map5q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Smu1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620694
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.