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Gene: Arhgef9 (Cdc42 guanine nucleotide exchange factor 9) Rattus norvegicus
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Symbol: Arhgef9
Name: Cdc42 guanine nucleotide exchange factor 9
Description: Predicted to have Rho guanyl-nucleotide exchange factor activity. Involved in receptor clustering. Localizes to several cellular components, including the GABA-ergic synapse; glycinergic synapse; and postsynaptic specialization. Human ortholog(s) of this gene implicated in early infantile epileptic encephalopathy 8. Orthologous to human ARHGEF9 (Cdc42 guanine nucleotide exchange factor 9); INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; benzo[a]pyrene; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Cdc42 guanine nucleotide exchange factor (GEF) 9; collybistin I; rac/Cdc42 guanine nucleotide exchange factor 9; rho guanine nucleotide exchange factor 9
Orthologs:
Homo sapiens (human) : ARHGEF9 (Cdc42 guanine nucleotide exchange factor 9)  HGNC  Alliance
Mus musculus (house mouse) : Arhgef9 (CDC42 guanine nucleotide exchange factor (GEF) 9)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Arhgef9 (Cdc42 guanine nucleotide exchange factor 9)
Pan paniscus (bonobo/pygmy chimpanzee) : ARHGEF9 (Cdc42 guanine nucleotide exchange factor 9)
Canis lupus familiaris (dog) : ARHGEF9 (Cdc42 guanine nucleotide exchange factor 9)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Arhgef9 (Cdc42 guanine nucleotide exchange factor 9)
Sus scrofa (pig) : ARHGEF9 (Cdc42 guanine nucleotide exchange factor 9)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0X64,249,576 - 64,428,444 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X65,150,714 - 65,329,116 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X82,594,347 - 82,754,179 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1X82,667,647 - 82,827,471 (-)NCBI
CeleraX60,352,255 - 60,508,707 (-)NCBICelera
Cytogenetic MapXq22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Arhgef9
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620719
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.