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Gene: Slc6a13 (solute carrier family 6 member 13) Rattus norvegicus
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Symbol: Slc6a13
Name: solute carrier family 6 member 13
Description: Exhibits gamma-aminobutyric acid:sodium symporter activity and neurotransmitter binding activity. Involved in neurotransmitter transport. Predicted to localize to the neuron projection and plasma membrane. Orthologous to human SLC6A13 (solute carrier family 6 member 13); INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: GAT-2; sodium- and chloride-dependent GABA transporter 2; solute carrier family 6 (neurotransmitter transporter), member 13; solute carrier family 6 (neurotransmitter transporter, GABA), member 13
Orthologs:
Homo sapiens (human) : SLC6A13 (solute carrier family 6 member 13)  HGNC  Alliance
Mus musculus (house mouse) : Slc6a13 (solute carrier family 6 (neurotransmitter transporter, GABA), member 13)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Slc6a13 (solute carrier family 6 member 13)
Pan paniscus (bonobo/pygmy chimpanzee) : SLC6A13 (solute carrier family 6 member 13)
Canis lupus familiaris (dog) : SLC6A13 (solute carrier family 6 member 13)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Slc6a13 (solute carrier family 6 member 13)
Sus scrofa (pig) : SLC6A13 (solute carrier family 6 member 13)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04153,874,942 - 153,912,185 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04220,962,968 - 221,000,197 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44157,736,264 - 157,771,945 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14157,981,199 - 158,016,881 (+)NCBI
Celera4143,379,280 - 143,414,859 (+)NCBICelera
Cytogenetic Map4q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Slc6a13
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620788
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.