Gene: Nectin1 (nectin cell adhesion molecule 1) Rattus norvegicus
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Symbol: Nectin1
Name: nectin cell adhesion molecule 1
Description: Exhibits carbohydrate binding activity, protein heterodimerization activity, and virion binding activity; involved in axon guidance, regulation of synapse assembly, and viral entry into host cell; localizes to the intracellular membrane-bounded organelle, neuron projection, and synapse; orthologous to human NECTIN1 (nectin cell adhesion molecule 1); INTERACTS WITH 1,2-dimethylhydrazine; 17alpha-ethynylestradiol; 17beta-estradiol.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: HveC; nectin; nectin); nectin-1; poliovirus receptor-related 1 (herpesvirus entry mediator C; poliovirus receptor-related 1 (herpesvirus entry mediator C, nectin); poliovirus receptor-related protein 1; Pvrl1
Orthologs:
Homo sapiens (human) : NECTIN1 (nectin cell adhesion molecule 1)  HGNC  Alliance
Mus musculus (house mouse) : Nectin1 (nectin cell adhesion molecule 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Nectin1 (nectin cell adhesion molecule 1)
Pan paniscus (bonobo/pygmy chimpanzee) : NECTIN1 (nectin cell adhesion molecule 1)
Canis lupus familiaris (dog) : NECTIN1 (nectin cell adhesion molecule 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Nectin1 (nectin cell adhesion molecule 1)
Sus scrofa (pig) : NECTIN1 (nectin cell adhesion molecule 1)
more info ...
Allele / Splice: Nectin1Tn(sb-T2/Bart3)2.284Mcwi  
Genetic Models: F344-Nectin1Tn(sb-T2/Bart3)2.284Mcwi
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0848,094,233 - 48,198,499 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0846,714,981 - 46,777,484 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4846,739,657 - 46,799,051 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1846,807,104 - 46,807,754 (+)NCBI
Celera843,690,971 - 43,754,034 (+)NCBICelera
Cytogenetic Map8q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Genetic Models
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Nectin1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620791
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.