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Gene: Srm (spermidine synthase) Rattus norvegicus
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Symbol: Srm
Name: spermidine synthase
Description: Exhibits spermidine synthase activity. Involved in spermidine biosynthetic process. Orthologous to human SRM (spermidine synthase); PARTICIPATES IN spermidine metabolic pathway; glycine N-methyltransferase deficiency pathway; homocystinuria pathway; INTERACTS WITH (+)-schisandrin B; (RS)-amphetamine; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Orthologs:
Homo sapiens (human) : SRM (spermidine synthase)  HGNC  Alliance
Mus musculus (house mouse) : Srm (spermidine synthase)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Srm (spermidine synthase)
Pan paniscus (bonobo/pygmy chimpanzee) : SRM (spermidine synthase)
Canis lupus familiaris (dog) : SRM (spermidine synthase)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Srm (spermidine synthase)
Sus scrofa (pig) : SRM (spermidine synthase)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05165,405,168 - 165,408,325 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.05169,061,769 - 169,064,926 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45165,672,516 - 165,675,673 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15165,682,703 - 165,685,859 (+)NCBI
Celera5157,302,130 - 157,305,203 (+)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Srm
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620796
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.