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Gene: Ssb (small RNA binding exonuclease protection factor La) Rattus norvegicus
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Symbol: Ssb
Name: small RNA binding exonuclease protection factor La
Description: Predicted to have poly(U) RNA binding activity; sequence-specific mRNA binding activity; and tRNA binding activity. Involved in tRNA processing. Predicted to localize to the cytoplasm and nucleus. Orthologous to human SSB (small RNA binding exonuclease protection factor La); PARTICIPATES IN tRNA maturation pathway; systemic lupus erythematosus pathway; INTERACTS WITH 2,6-dinitrotoluene; 3H-1,2-dithiole-3-thione; ammonium chloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: la autoantigen homolog; la ribonucleoprotein; lupus La protein homolog; MGC93380; mRNA for autoantigen; Sjogren syndrome antigen B
Orthologs:
Homo sapiens (human) : SSB (small RNA binding exonuclease protection factor La)  HGNC  Alliance
Mus musculus (house mouse) : Ssb (Sjogren syndrome antigen B)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ssb (small RNA binding exonuclease protection factor La)
Pan paniscus (bonobo/pygmy chimpanzee) : SSB (small RNA binding exonuclease protection factor La)
Canis lupus familiaris (dog) : SSB (small RNA binding exonuclease protection factor La)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ssb (small RNA binding exonuclease protection factor La)
Sus scrofa (pig) : SSB (small RNA binding exonuclease protection factor La)
Chlorocebus sabaeus (African green monkey) : SSB (small RNA binding exonuclease protection factor La)
Heterocephalus glaber (naked mole-rat) : Ssb (small RNA binding exonuclease protection factor La)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0356,092,425 - 56,102,008 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl356,092,501 - 56,102,001 (+)Ensembl
Rnor_5.0362,727,433 - 62,737,034 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4352,001,106 - 52,010,611 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1351,897,477 - 51,906,978 (+)NCBI
Celera354,176,184 - 54,185,689 (+)NCBICelera
Cytogenetic Map3q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Ssb
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620804
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2020-01-07
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.