Gene: Slc12a5 (solute carrier family 12 member 5) Rattus norvegicus
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Symbol: Slc12a5
Name: solute carrier family 12 member 5
Description: Exhibits ammonium transmembrane transporter activity and potassium:chloride symporter activity; involved in several processes, including cation transport, chloride transport, and dendritic spine development; localizes to the dendrite membrane and perikaryon; orthologous to human SLC12A5 (solute carrier family 12 member 5); INTERACTS WITH (+)-pilocarpine; (RS)-amphetamine; 2,4,6-trinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: electroneutral potassium-chloride cotransporter 2; furosemide-sensitive K-Cl cotransporter; K-Cl cotransporter 2; Kcc2; neuronal K-Cl cotransporter; neuronal-specific K-Cl cotransporter; rKCC2; solute carrier family 12 (potassium-chloride transporter), member 5; solute carrier family 12, (potassium-chloride transporter) member 5; solute carrier family 12, member 5
Orthologs:
Homo sapiens (human) : SLC12A5 (solute carrier family 12 member 5)  HGNC  Alliance
Mus musculus (house mouse) : Slc12a5 (solute carrier family 12, member 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Slc12a5 (solute carrier family 12 member 5)
Pan paniscus (bonobo/pygmy chimpanzee) : SLC12A5 (solute carrier family 12 member 5)
Canis lupus familiaris (dog) : SLC12A5 (solute carrier family 12 member 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Slc12a5 (solute carrier family 12 member 5)
Sus scrofa (pig) : SLC12A5 (solute carrier family 12 member 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03161,433,303 - 161,465,078 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.03167,617,776 - 167,649,551 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43156,006,017 - 156,037,915 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13155,912,052 - 155,943,951 (+)NCBI
Celera3152,309,197 - 152,341,061 (+)NCBICelera
Cytogenetic Map3q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Candidate Gene Status
Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Slc12a5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620811
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.