Gene: Chi3l1 (chitinase 3 like 1) Rattus norvegicus
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Symbol: Chi3l1
Name: chitinase 3 like 1
Description: Predicted to have chitin binding activity; involved in cellular response to interleukin-1, cellular response to tumor necrosis factor, and inflammatory response; localizes to the extracellular space; biomarker of hypertension; orthologous to human CHI3L1 (chitinase 3 like 1); PARTICIPATES IN amino sugar metabolic pathway; nucleotide sugar metabolic pathway; INTERACTS WITH (RS)-amphetamine; aflatoxin B1; ammonium chloride.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: cartilage glycoprotein 39; CGP-39; Chil1; chitinase 3-like 1; chitinase 3-like 1 (cartilage glycoprotein-39); chitinase-3-like protein 1; GP-39; MGC109420
Orthologs:
Homo sapiens (human) : CHI3L1 (chitinase 3 like 1)  HGNC  Alliance
Mus musculus (house mouse) : Chil1 (chitinase-like 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Chi3l1 (chitinase 3 like 1)
Pan paniscus (bonobo/pygmy chimpanzee) : CHI3L1 (chitinase 3 like 1)
Canis lupus familiaris (dog) : CHI3L1 (chitinase 3 like 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Chi3l1 (chitinase 3 like 1)
Sus scrofa (pig) : CHI3L1 (chitinase 3 like 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01351,022,844 - 51,030,797 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01356,074,912 - 56,086,477 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41347,139,658 - 47,147,591 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11347,155,099 - 47,161,151 (+)NCBI
Celera1345,969,872 - 45,977,855 (+)NCBICelera
Cytogenetic Map13q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
Phenotype Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Chi3l1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620874
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.