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Gene: Hdlbp (high density lipoprotein binding protein) Rattus norvegicus
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Symbol: Hdlbp
Name: high density lipoprotein binding protein
Description: Predicted to have RNA binding activity. Predicted to be involved in cholesterol metabolic process and lipid transport. Predicted to localize to the cytosol. Orthologous to human HDLBP (high density lipoprotein binding protein); INTERACTS WITH 1,2,4-trimethylbenzene; 17beta-estradiol; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: HDL-binding protein; high density lipoprotein binding protein (vigilin); high density lipoprotein-binding protein; lipoprotein-binding protein; MGC124559; vigilin
Orthologs:
Homo sapiens (human) : HDLBP (high density lipoprotein binding protein)  HGNC  Alliance
Mus musculus (house mouse) : Hdlbp (high density lipoprotein (HDL) binding protein)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Hdlbp (high density lipoprotein binding protein)
Pan paniscus (bonobo/pygmy chimpanzee) : HDLBP (high density lipoprotein binding protein)
Canis lupus familiaris (dog) : HDLBP (high density lipoprotein binding protein)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Hdlbp (high density lipoprotein binding protein)
Sus scrofa (pig) : HDLBP (high density lipoprotein binding protein)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.09100,554,574 - 100,624,707 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl9100,554,563 - 100,624,638 (-)Ensembl
Rnor_5.09100,207,602 - 100,277,717 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4992,687,612 - 92,755,853 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1992,892,384 - 92,960,622 (-)NCBI
Celera991,484,527 - 91,552,602 (-)NCBICelera
Cytogenetic Map9q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Hdlbp
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620962
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.