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Gene: Stx12 (syntaxin 12) Rattus norvegicus
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Symbol: Stx12
Name: syntaxin 12
Description: Predicted to have SNAP receptor activity and SNARE binding activity. Involved in synaptic vesicle to endosome fusion. Localizes to the integral component of synaptic vesicle membrane and postsynaptic recycling endosome. Predicted to colocalize with the BLOC-1 complex. Orthologous to human STX12 (syntaxin 12); PARTICIPATES IN phagocytosis pathway; INTERACTS WITH (RS)-amphetamine; 2,4-dinitrotoluene; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: Syn13; syntaxin-12; syntaxin-13
Orthologs:
Homo sapiens (human) : STX12 (syntaxin 12)  HGNC  Alliance
Mus musculus (house mouse) : Stx12 (syntaxin 12)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Stx12 (syntaxin 12)
Pan paniscus (bonobo/pygmy chimpanzee) : STX12 (syntaxin 12)
Canis lupus familiaris (dog) : STX12 (syntaxin 12)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Stx12 (syntaxin 12)
Sus scrofa (pig) : STX12 (syntaxin 12)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05151,044,050 - 151,072,893 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.05154,710,849 - 154,740,301 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45152,261,969 - 152,290,210 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15152,272,085 - 152,298,839 (+)NCBI
Celera5143,487,210 - 143,515,451 (-)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Stx12
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620977
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.