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Gene: Mtdh (metadherin) Rattus norvegicus
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Symbol: Mtdh
Name: metadherin
Description: Predicted to have double-stranded RNA binding activity; transcription coactivator activity; and transcription factor binding activity. Involved in bicellular tight junction assembly. Localizes to several cellular components, including the apical plasma membrane; bicellular tight junction; and intercellular canaliculus. Orthologous to human MTDH (metadherin); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LYRIC; lysine-rich CEACAM1 co-isolated protein; metastasis adhesion protein
Orthologs:
Homo sapiens (human) : MTDH (metadherin)  HGNC  Alliance
Mus musculus (house mouse) : Mtdh (metadherin)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Mtdh (metadherin)
Pan paniscus (bonobo/pygmy chimpanzee) : MTDH (metadherin)
Canis lupus familiaris (dog) : MTDH (metadherin)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Mtdh (metadherin)
Sus scrofa (pig) : MTDH (metadherin)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0772,771,018 - 72,830,599 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0772,938,130 - 72,997,298 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.0773,209,610 - 73,233,540 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4769,527,182 - 69,583,015 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1769,547,911 - 69,603,745 (+)NCBI
Celera762,413,649 - 62,469,018 (+)NCBICelera
Cytogenetic Map7q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Mtdh
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620992
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.