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Gene: Spata7 (spermatogenesis associated 7) Rattus norvegicus
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Symbol: Spata7
Name: spermatogenesis associated 7
Description: Involved in spermatogenesis. Predicted to localize to the cilium; cytoplasm; and nucleoplasm. Human ortholog(s) of this gene implicated in Leber congenital amaurosis 3. Orthologous to human SPATA7 (spermatogenesis associated 7); INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; 2,2',5,5'-tetrachlorobiphenyl; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: fertility related protein WMP1; fertility-related protein WMP1; rat sperm DNA no.3; RSD-3; sperm DNA no.3; spermatogenesis-associated protein 7 homolog; Wmp1
Orthologs:
Homo sapiens (human) : SPATA7 (spermatogenesis associated 7)  HGNC  Alliance
Mus musculus (house mouse) : Spata7 (spermatogenesis associated 7)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Spata7 (spermatogenesis associated 7)
Pan paniscus (bonobo/pygmy chimpanzee) : SPATA7 (spermatogenesis associated 7)
Canis lupus familiaris (dog) : SPATA7 (spermatogenesis associated 7)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Spata7 (spermatogenesis associated 7)
Sus scrofa (pig) : SPATA7 (spermatogenesis associated 7)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.06122,603,248 - 122,648,718 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.06131,817,495 - 131,862,960 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46122,786,739 - 122,832,181 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.16122,796,896 - 122,836,008 (+)NCBI
Celera6115,441,836 - 115,487,163 (+)NCBICelera
Cytogenetic Map6q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Spata7
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 621010
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.