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Gene: H3f3b (H3 histone family member 3B) Rattus norvegicus
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Symbol: H3f3b
Name: H3 histone family member 3B
CRRD ID: 621095
Description: Predicted to have RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; RNA polymerase II core promoter sequence-specific DNA binding activity; and nucleosomal DNA binding activity. Involved in brain development and response to hormone. Predicted to localize to nuclear chromosome, telomeric region and nuclear nucleosome. Orthologous to human H3-3B (H3.3 histone B); PARTICIPATES IN histone modification pathway; systemic lupus erythematosus pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene; 4-tert-Octylphenol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: H3 histone, family 3B; H3-3b; H3.3B; histone H3.3; MGC105794
Orthologs:
Homo sapiens (human) : H3-3B (H3.3 histone B)  HGNC  Alliance
Mus musculus (house mouse) : H3f3b (H3.3 histone B)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : H3f3b (H3 histone, family 3B)
Pan paniscus (bonobo/pygmy chimpanzee) : LOC100988671 (histone H3.3A)
Canis lupus familiaris (dog) : H3-3B (H3.3 histone B)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : LOC101963257 (histone H3.3)
Sus scrofa (pig) : LOC100521680 (histone H3.3)
Chlorocebus sabaeus (African green monkey) : H3F3B (H3 histone, family 3B)
Heterocephalus glaber (naked mole-rat) : LOC101698172 (histone H3.3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.010104,573,666 - 104,575,890 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl10104,573,664 - 104,575,890 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.010103,709,482 - 103,711,706 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.410106,130,320 - 106,132,544 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.110106,144,823 - 106,147,045 (-)NCBI
Celera1099,830,619 - 99,832,836 (-)NCBICelera
Cytogenetic Map10q32.1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on H3f3b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 621095
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.