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Gene: Taf9b (TATA-box binding protein associated factor 9b) Rattus norvegicus
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Symbol: Taf9b
Name: TATA-box binding protein associated factor 9b
Description: Predicted to contribute to histone acetyltransferase activity. Involved in programmed cell death and response to organic cyclic compound. Predicted to localize to the SAGA complex; transcription factor TFIID complex; and transcription factor TFTC complex. Orthologous to human TAF9B (TATA-box binding protein associated factor 9b); INTERACTS WITH 1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane; 17alpha-ethynylestradiol; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: DN-7; Dn7; neuronal cell death-related gene in neuron 7; neuronal cell death-related gene in neuron-7; TAF9-like RNA polymerase II TATA box binding protein (TBP)-associated factor 31 kD; TAF9-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31 kD; TAF9-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa; TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor; Taf9l; TAFII31; transcription initiation factor TFIID subunit 9-like; transcription initiation factor TFIID subunit 9B; transcription-associated factor TAFII31L
Orthologs:
Homo sapiens (human) : TAF9B (TATA-box binding protein associated factor 9b)  HGNC  Alliance
Mus musculus (house mouse) : Taf9b (TATA-box binding protein associated factor 9B)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Taf9b (TATA-box binding protein associated factor 9b)
Pan paniscus (bonobo/pygmy chimpanzee) : TAF9B (TATA-box binding protein associated factor 9b)
Canis lupus familiaris (dog) : TAF9B (TATA-box binding protein associated factor 9b)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Taf9b (TATA-box binding protein associated factor 9b)
Sus scrofa (pig) : TAF9B (TATA-box binding protein associated factor 9b)
Chlorocebus sabaeus (green monkey) : TAF9B (TATA-box binding protein associated factor 9b)
Heterocephalus glaber (naked mole-rat) : Taf9b (TATA-box binding protein associated factor 9b)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0X77,281,234 - 77,295,238 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX77,281,210 - 77,295,426 (-)Ensembl
Rnor_5.0X56,401,294 - 56,416,018 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X94,342,071 - 94,351,927 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1X94,415,515 - 94,425,356 (-)NCBI
CeleraX72,601,506 - 72,610,854 (-)NCBICelera
Cytogenetic MapXq22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Taf9b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 621116
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.