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Gene: Nlgn1 (neuroligin 1) Rattus norvegicus
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Symbol: Nlgn1
Name: neuroligin 1
Description: Exhibits several functions, including cell adhesion molecule binding activity; identical protein binding activity; and neurexin family protein binding activity. Involved in several processes, including positive regulation of cellular component organization; positive regulation of synaptic transmission; and synapse organization. Localizes to several cellular components, including dendrite; filopodium tip; and integral component of postsynaptic specialization membrane. Colocalizes with NMDA selective glutamate receptor complex and postsynaptic density. Biomarker of status epilepticus. Orthologous to human NLGN1 (neuroligin 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; androgen antagonist; atrazine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: neuroligin I; neuroligin-1
Orthologs:
Homo sapiens (human) : NLGN1 (neuroligin 1)  HGNC  Alliance
Mus musculus (house mouse) : Nlgn1 (neuroligin 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Nlgn1 (neuroligin 1)
Pan paniscus (bonobo/pygmy chimpanzee) : NLGN1 (neuroligin 1)
Canis lupus familiaris (dog) : NLGN1 (neuroligin 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Nlgn1 (neuroligin 1)
Sus scrofa (pig) : NLGN1 (neuroligin 1)
Chlorocebus sabaeus (African green monkey) : NLGN1 (neuroligin 1)
Heterocephalus glaber (naked mole-rat) : Nlgn1 (neuroligin 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02111,057,291 - 111,973,681 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2111,057,291 - 111,793,326 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02130,770,580 - 131,688,440 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42111,189,470 - 111,948,145 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12111,133,661 - 111,893,471 (-)NCBI
Celera2103,515,760 - 104,229,754 (-)NCBICelera
Cytogenetic Map2q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Nlgn1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 621117
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.