Gene: Syt9 (synaptotagmin 9) Rattus norvegicus
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Symbol: Syt9
Name: synaptotagmin 9
Description: Predicted to have several functions, including calcium ion binding activity, clathrin binding activity, and phospholipid binding activity; involved in positive regulation of calcium ion-dependent exocytosis and regulation of insulin secretion; localizes to the dense core granule and secretory granule membrane; orthologous to human SYT9 (synaptotagmin 9); PARTICIPATES IN calcium/calcium-mediated signaling pathway; insulin secretion pathway; INTERACTS WITH ammonium chloride; bisphenol A; chlorpyrifos.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: synaptogamin V; synaptotagmin 5; synaptotagmin IX; synaptotagmin V; synaptotagmin-9; sytIX; Sytv
Orthologs:
Homo sapiens (human) : SYT9 (synaptotagmin 9)  HGNC  Alliance
Mus musculus (house mouse) : Syt9 (synaptotagmin IX)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Syt9 (synaptotagmin 9)
Pan paniscus (bonobo/pygmy chimpanzee) : SYT9 (synaptotagmin 9)
Canis lupus familiaris (dog) : SYT9 (synaptotagmin 9)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Syt9 (synaptotagmin 9)
Sus scrofa (pig) : SYT9 (synaptotagmin 9)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01171,592,703 - 171,769,780 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01178,591,031 - 178,768,239 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41164,722,168 - 164,928,937 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11164,817,644 - 165,024,414 (+)NCBI
Celera1159,180,385 - 159,358,526 (+)NCBICelera
Cytogenetic Map1q33NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Syt9
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 621169
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.