Gene: Cdx2 (caudal type homeo box 2) Rattus norvegicus
Analyze
Symbol: Cdx2
Name: caudal type homeo box 2
Description: Exhibits DNA-binding transcription factor activity and double-stranded DNA binding activity; involved in positive regulation of cell population proliferation and positive regulation of transcription, DNA-templated; localizes to the nucleus; orthologous to human CDX2 (caudal type homeobox 2); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; beta-naphthoflavone; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: homeobox protein CDX-2
Orthologs:
Homo sapiens (human) : CDX2 (caudal type homeobox 2)  HGNC  Alliance
Mus musculus (house mouse) : Cdx2 (caudal type homeobox 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cdx2 (caudal type homeobox 2)
Pan paniscus (bonobo/pygmy chimpanzee) : CDX2 (caudal type homeobox 2)
Canis lupus familiaris (dog) : CDX2 (caudal type homeobox 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cdx2 (caudal type homeobox 2)
Sus scrofa (pig) : CDX2 (caudal type homeobox 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: suggests misassembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0129,464,026 - 9,470,565 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01211,578,762 - 11,585,434 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4128,296,103 - 8,303,643 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1128,326,030 - 8,333,571 (+)NCBI
Celera129,464,881 - 9,471,223 (+)NCBICelera
Cytogenetic Map12p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Cdx2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 621234
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.