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Gene: Fat1 (FAT atypical cadherin 1) Rattus norvegicus
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Symbol: Fat1
Name: FAT atypical cadherin 1
Description: Predicted to have calcium ion binding activity. Predicted to be involved in several processes, including camera-type eye morphogenesis; epithelial cell morphogenesis; and establishment or maintenance of epithelial cell apical/basal polarity. Predicted to localize to several cellular components, including the apical plasma membrane; filopodium; and lamellipodium. Orthologous to human FAT1 (FAT atypical cadherin 1); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 1-naphthyl isothiocyanate; 17alpha-ethynylestradiol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: cadherin FAT1 isoform +12; Fat; FAT tumor suppressor (Drosophila) homolog; fat tumor suppressor homolog (Drosophila); FAT tumor suppressor homolog 1; FAT tumor suppressor homolog 1 (Drosophila); Fath; protocadherin Fat 1
Orthologs:
Homo sapiens (human) : FAT1 (FAT atypical cadherin 1)  HGNC  Alliance
Mus musculus (house mouse) : Fat1 (FAT atypical cadherin 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Fat1 (FAT atypical cadherin 1)
Pan paniscus (bonobo/pygmy chimpanzee) : FAT1 (FAT atypical cadherin 1)
Canis lupus familiaris (dog) : FAT1 (FAT atypical cadherin 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Fat1 (FAT atypical cadherin 1)
Sus scrofa (pig) : FAT1 (FAT atypical cadherin 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01650,372,150 - 50,501,716 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01650,093,077 - 50,220,862 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41650,472,074 - 50,591,399 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11650,472,148 - 50,591,474 (-)NCBI
Celera1645,165,920 - 45,284,243 (-)NCBICelera
Cytogenetic Map16q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Fat1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 621254
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.