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Gene: Vps45 (vacuolar protein sorting 45 homolog) Rattus norvegicus
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Symbol: Vps45
Name: vacuolar protein sorting 45 homolog
Description: Predicted to be involved in protein transport and vesicle docking involved in exocytosis. Localizes to the Golgi apparatus; integral component of membrane; and synaptic vesicle. Human ortholog(s) of this gene implicated in severe congenital neutropenia. Orthologous to human VPS45 (vacuolar protein sorting 45 homolog); PARTICIPATES IN endocytosis pathway; INTERACTS WITH 2,6-dinitrotoluene; 3-chloropropane-1,2-diol; 3H-1,2-dithiole-3-thione.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: MGC93104; rvps45; vacuolar protein sorting 45; vacuolar protein sorting 45 (yeast); vacuolar protein sorting 45 homolog (S. cerevisiae); vacuolar protein sorting-associated protein 45; vesicular transport protein rvps45; Vsp45a
Orthologs:
Homo sapiens (human) : VPS45 (vacuolar protein sorting 45 homolog)  HGNC  Alliance
Mus musculus (house mouse) : Vps45 (vacuolar protein sorting 45)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Vps45 (vacuolar protein sorting 45 homolog)
Pan paniscus (bonobo/pygmy chimpanzee) : VPS45 (vacuolar protein sorting 45 homolog)
Canis lupus familiaris (dog) : VPS45 (vacuolar protein sorting 45 homolog)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Vps45 (vacuolar protein sorting 45 homolog)
Sus scrofa (pig) : VPS45 (vacuolar protein sorting 45 homolog)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02198,123,747 - 198,184,739 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02217,613,523 - 217,674,338 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42190,799,602 - 190,859,954 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12190,762,356 - 190,822,708 (-)NCBI
Celera2176,084,339 - 176,144,558 (-)NCBICelera
Cytogenetic Map2q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Vps45
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 621267
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.