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Gene: Trpc4 (transient receptor potential cation channel, subfamily C, member 4) Rattus norvegicus
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Symbol: Trpc4
Name: transient receptor potential cation channel, subfamily C, member 4
Description: Exhibits calcium channel activity. Involved in calcium ion transport and regulation of calcium ion transport. Localizes to the cytoplasm and integral component of plasma membrane. Predicted to colocalize with the cell-cell junction. Orthologous to human TRPC4 (transient receptor potential cation channel subfamily C member 4); INTERACTS WITH 17alpha-ethynylestradiol; 6-propyl-2-thiouracil; benzo[a]pyrene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: capacitative calcium entry channel 1; CCE1; short transient receptor potential channel 4; transient receptor potential 4; transient receptor potential channel 4; transient receptor potential protein 4; transient receptor protein 4; Trp4; Trrp4
Orthologs:
Allele / Splice: Trpc4_v1   Trpc4_v2   Trpc4Tn(sb-T2/Bart3)2.192Mcwi  
Genetic Models: F344-Trpc4Tn(sb-T2/Bart3)2.192Mcwi
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02143,433,102 - 143,605,757 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2143,475,323 - 143,604,972 (+)Ensembl
Rnor_5.02163,115,873 - 163,282,223 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42143,350,286 - 143,485,716 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12143,254,891 - 143,435,776 (+)NCBI
Celera2132,835,300 - 132,958,908 (+)NCBICelera
Cytogenetic Map2q26NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Candidate Gene Status
Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Genetic Models
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Trpc4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 621276
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.