Gene: Atp2a1 (ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1) Rattus norvegicus
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Symbol: Atp2a1
Name: ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1
Description: Exhibits ATP binding activity, calcium ion binding activity, and transmembrane transporter activity; involved in response to peptide hormone and sarcoplasmic reticulum calcium ion transport; localizes to the sarcoplasmic reticulum; biomarker of type 2 diabetes mellitus; orthologous to human ATP2A1 (ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; Alzheimer's disease pathway; INTERACTS WITH 2,6-di-tert-butyl-4-methylphenol; 3H-1,2-dithiole-3-thione; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: ATPase, Ca++ transporting, cardiac muscle, fast twitch 1; calcium pump 1; calcium-transporting ATPase sarcoplasmic reticulum type, fast twitch skeletal muscle isoform; endoplasmic reticulum class 1/2 Ca(2+) ATPase; sarco/endoplasmic reticulum calcium ATPase 1; sarco/endoplasmic reticulum calcium ATPase 1a; sarco/endoplasmic reticulum calcium ATPase 1b; sarcoplasmic/endoplasmic reticulum calcium ATPase 1; Serca1; SR Ca(2+)-ATPase 1
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01197,855,912 - 197,875,038 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01204,836,393 - 204,854,172 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1178,686,581 - 178,704,188 (-)NCBICelera
Cytogenetic Map1q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Atp2a1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 621293
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.