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Gene: Atp2b3 (ATPase plasma membrane Ca2+ transporting 3) Rattus norvegicus
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Symbol: Atp2b3
Name: ATPase plasma membrane Ca2+ transporting 3
Description: Exhibits PDZ domain binding activity. Involved in brain development and neural retina development. Localizes to several cellular components, including the glutamatergic synapse; integral component of presynaptic membrane; and parallel fiber to Purkinje cell synapse. Orthologous to human ATP2B3 (ATPase plasma membrane Ca2+ transporting 3); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: ATPase, Ca++ transporting, plasma membrane 3; plasma membrane calcium ATPase; plasma membrane calcium pump; plasma membrane calcium-transporting ATPase 3; Pmca3
Orthologs:
Homo sapiens (human) : ATP2B3 (ATPase plasma membrane Ca2+ transporting 3)  HGNC  Alliance
Mus musculus (house mouse) : Atp2b3 (ATPase, Ca++ transporting, plasma membrane 3)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Atp2b3 (ATPase plasma membrane Ca2+ transporting 3)
Pan paniscus (bonobo/pygmy chimpanzee) : ATP2B3 (ATPase plasma membrane Ca2+ transporting 3)
Canis lupus familiaris (dog) : ATP2B3 (ATPase plasma membrane Ca2+ transporting 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Atp2b3 (ATPase plasma membrane Ca2+ transporting 3)
Sus scrofa (pig) : ATP2B3 (ATPase plasma membrane Ca2+ transporting 3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0X157,236,400 - 157,312,028 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01152,988,825 - 153,056,732 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X159,400,374 - 159,470,665 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1X159,473,827 - 159,544,098 (+)NCBI
Celera1136,605,191 - 136,673,058 (-)NCBICelera
Cytogenetic MapXq37NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
Phenotype Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Atp2b3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 621304
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-09-03
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.