Gene: Phox2a (paired-like homeobox 2a) Rattus norvegicus
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Symbol: Phox2a
Name: paired-like homeobox 2a
Description: Exhibits DNA-binding transcription activator activity, RNA polymerase II-specific; involved in aging and positive regulation of transcription by RNA polymerase II; predicted to localize to the nuclear chromatin; orthologous to human PHOX2A (paired like homeobox 2A); INTERACTS WITH 6-propyl-2-thiouracil; ammonium chloride; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: aristaless (Drosophila) homeobox; aristaless homeobox protein homolog; Arix; ARIX1 homeodomain protein; paired mesoderm homeobox protein 2A
Orthologs:
Homo sapiens (human) : PHOX2A (paired like homeobox 2A)  HGNC  Alliance
Mus musculus (house mouse) : Phox2a (paired-like homeobox 2a)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Phox2a (paired like homeobox 2A)
Pan paniscus (bonobo/pygmy chimpanzee) : PHOX2A (paired like homeobox 2A)
Canis lupus familiaris (dog) : PHOX2A (paired like homeobox 2A)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Phox2a (paired like homeobox 2A)
Sus scrofa (pig) : PHOX2A (paired like homeobox 2A)
more info ...
Is Marker For: QTLs:   Bp154   Bw55   Bw98   Bw104  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: suggests misassembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01166,893,734 - 166,898,252 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01173,083,448 - 173,087,966 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41159,273,524 - 159,312,136 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11159,352,540 - 159,356,748 (+)NCBI
Celera1154,257,374 - 154,261,739 (+)NCBICelera
Cytogenetic Map1q32NCBI
RH 3.4 Map11272.9RGD
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Candidate Gene Status
Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Phox2a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 621323
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.