Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Nova1 (NOVA alternative splicing regulator 1) Rattus norvegicus
Analyze
Symbol: Nova1
Name: NOVA alternative splicing regulator 1
Description: Predicted to have mRNA binding activity. Involved in regulation of mRNA processing and spinal cord development. Predicted to localize to the nucleolus and nucleoplasm. Orthologous to human NOVA1 (NOVA alternative splicing regulator 1); INTERACTS WITH (+)-pilocarpine; 2,3,7,8-tetrachlorodibenzodioxine; ammonium chloride.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: neuro-oncological ventral antigen 1; Nova-1; RNA-binding protein Nova-1
Orthologs:
Homo sapiens (human) : NOVA1 (NOVA alternative splicing regulator 1)  HGNC  Alliance
Mus musculus (house mouse) : Nova1 (NOVA alternative splicing regulator 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Nova1 (NOVA alternative splicing regulator 1)
Pan paniscus (bonobo/pygmy chimpanzee) : NOVA1 (NOVA alternative splicing regulator 1)
Canis lupus familiaris (dog) : NOVA1 (NOVA alternative splicing regulator 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Nova1 (NOVA alternative splicing regulator 1)
Sus scrofa (pig) : NOVA1 (NOVA alternative splicing regulator 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0666,960,126 - 67,085,836 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl666,963,510 - 67,085,390 (-)Ensembl
Rnor_5.0676,535,375 - 76,660,962 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4666,193,472 - 66,320,240 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1666,202,073 - 66,323,082 (-)NCBI
Celera662,747,220 - 62,869,241 (-)NCBICelera
Cytogenetic Map6q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Nova1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 621345
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.