Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Ptcra (pre T-cell antigen receptor alpha) Rattus norvegicus
Analyze
Symbol: Ptcra
Name: pre T-cell antigen receptor alpha
Description: Predicted to be involved in negative regulation of thymocyte apoptotic process. Predicted to localize to the integral component of membrane. Orthologous to human PTCRA (pre T cell antigen receptor alpha); PARTICIPATES IN Notch signaling pathway; INTERACTS WITH 1-chloro-2,4-dinitrobenzene (ortholog); 2,3,7,8-tetrachlorodibenzodioxine (ortholog); 4,4'-diaminodiphenylmethane (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: pT-alpha; pT-alpha-TCR; pTa
Orthologs:
Homo sapiens (human) : PTCRA (pre T cell antigen receptor alpha)  HGNC  Alliance
Mus musculus (house mouse) : Ptcra (pre T cell antigen receptor alpha)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ptcra (pre T cell antigen receptor alpha)
Pan paniscus (bonobo/pygmy chimpanzee) : PTCRA (pre T cell antigen receptor alpha)
Canis lupus familiaris (dog) : PTCRA (pre T cell antigen receptor alpha)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ptcra (pre T cell antigen receptor alpha)
Sus scrofa (pig) : PTCRA (pre T cell antigen receptor alpha)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0916,528,970 - 16,539,383 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl916,529,579 - 16,539,472 (+)Ensembl
Rnor_5.0915,436,852 - 15,445,993 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.1910,095,697 - 10,098,251 (+)NCBI
Celera911,966,527 - 11,977,493 (+)NCBICelera
Cytogenetic Map9q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ptcra
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 621388
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.