Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Srp54a (signal recognition particle 54A) Rattus norvegicus
Analyze
Symbol: Srp54a
Name: signal recognition particle 54A
CRRD ID: 621390
Description: Predicted to contribute to GTPase activity. Predicted to be involved in several processes, including SRP-dependent cotranslational protein targeting to membrane; exocrine pancreas development; and neutrophil chemotaxis. Predicted to localize to cytosol; nucleus; and signal recognition particle, endoplasmic reticulum targeting. Human ortholog(s) of this gene implicated in severe congenital neutropenia. Orthologous to human SRP54 (signal recognition particle 54); INTERACTS WITH 2,6-dinitrotoluene; bisphenol A; decabromodiphenyl ether.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: signal recognition particle 54; signal recognition particle 54 kDa; signal recognition particle 54kDa; Srp54
Orthologs:
Homo sapiens (human) : SRP54 (signal recognition particle 54)  HGNC  Alliance
Mus musculus (house mouse) : Srp54a (signal recognition particle 54A)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Srp54 (signal recognition particle 54)
Pan paniscus (bonobo/pygmy chimpanzee) : SRP54 (signal recognition particle 54)
Canis lupus familiaris (dog) : SRP54 (signal recognition particle 54)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Srp54 (signal recognition particle 54)
Sus scrofa (pig) : SRP54 (signal recognition particle 54)
Chlorocebus sabaeus (African green monkey) : SRP54 (signal recognition particle 54)
Heterocephalus glaber (naked mole-rat) : Srp54 (signal recognition particle 54)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0675,996,629 - 76,035,768 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl675,996,643 - 76,034,083 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0685,532,350 - 85,572,100 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4675,446,838 - 75,494,001 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1675,474,626 - 75,478,796 (+)NCBI
Celera671,428,873 - 71,466,500 (+)NCBICelera
Cytogenetic Map6q23NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Srp54a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 621390
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2020-09-09
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.