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Gene: Tnrc6b (trinucleotide repeat containing adaptor 6B) Rattus norvegicus
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Symbol: Tnrc6b
Name: trinucleotide repeat containing adaptor 6B
Description: Predicted to have nucleic acid binding activity. Predicted to be involved in gene silencing by miRNA and positive regulation of nuclear-transcribed mRNA poly(A) tail shortening. Predicted to localize to the P-body; RISC complex; and nucleoplasm. Human ortholog(s) of this gene implicated in subserous uterine fibroid and uterine fibroid. Orthologous to human TNRC6B (trinucleotide repeat containing adaptor 6B); PARTICIPATES IN microRNA pathway; INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 2,6-dinitrotoluene; ammonium chloride.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: androgen receptor-related apoptosis-associated protein CBL27; Cbl27; trinucleotide repeat containing 6B; trinucleotide repeat-containing gene 6B protein
Orthologs:
Homo sapiens (human) : TNRC6B (trinucleotide repeat containing adaptor 6B)  HGNC  Alliance
Mus musculus (house mouse) : Tnrc6b (trinucleotide repeat containing 6b)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tnrc6b (trinucleotide repeat containing adaptor 6B)
Pan paniscus (bonobo/pygmy chimpanzee) : TNRC6B (trinucleotide repeat containing adaptor 6B)
Canis lupus familiaris (dog) : TNRC6B (trinucleotide repeat containing adaptor 6B)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tnrc6b (trinucleotide repeat containing adaptor 6B)
Sus scrofa (pig) : TNRC6B (trinucleotide repeat containing adaptor 6B)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.07121,930,610 - 122,147,934 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.07121,922,421 - 122,139,717 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47118,993,653 - 119,212,958 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.17119,193,462 - 119,235,531 (+)NCBI
Celera7108,576,591 - 108,793,423 (+)NCBICelera
Cytogenetic Map7q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Tnrc6b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 621428
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.