Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Lim2 (lens intrinsic membrane protein 2) Rattus norvegicus
Analyze
Symbol: Lim2
Name: lens intrinsic membrane protein 2
Description: Predicted to be a structural constituent of eye lens. Predicted to be involved in lens development in camera-type eye. Localizes to the plasma membrane and vesicle. Human ortholog(s) of this gene implicated in cataract and cataract 19 multiple types. Orthologous to human LIM2 (lens intrinsic membrane protein 2); INTERACTS WITH acrylamide; ammonium chloride; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: lens fiber membrane intrinsic protein; lens intrinsic membrane protein 2 (19 kDa); lens intrinsic membrane protein 2, 19kDa; MP17; MP18; Mp19; MP20
Orthologs:
Homo sapiens (human) : LIM2 (lens intrinsic membrane protein 2)  HGNC  Alliance
Mus musculus (house mouse) : Lim2 (lens intrinsic membrane protein 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Lim2 (lens intrinsic membrane protein 2)
Pan paniscus (bonobo/pygmy chimpanzee) : LIM2 (lens intrinsic membrane protein 2)
Canis lupus familiaris (dog) : LIM2 (lens intrinsic membrane protein 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Lim2 (lens intrinsic membrane protein 2)
Sus scrofa (pig) : LIM2 (lens intrinsic membrane protein 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0198,495,082 - 98,501,248 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0199,571,887 - 99,578,053 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4193,805,817 - 93,811,981 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1193,883,926 - 93,890,087 (+)NCBI
Celera188,114,711 - 88,120,877 (+)NCBICelera
Cytogenetic Map1q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Lim2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 621482
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.