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Gene: Rnf138 (ring finger protein 138) Rattus norvegicus
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Symbol: Rnf138
Name: ring finger protein 138
Description: Predicted to have protein kinase binding activity; single-stranded DNA binding activity; and ubiquitin protein ligase activity. Predicted to be involved in cellular response to leukemia inhibitory factor; double-strand break repair; and protein ubiquitination. Predicted to localize to the site of double-strand break. Orthologous to human RNF138 (ring finger protein 138); INTERACTS WITH (+)-schisandrin B; 2,4-dinitrotoluene; alachlor.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: E3 ubiquitin-protein ligase RNF138; MGC72355; ring finger protein 138, E3 ubiquitin protein ligase; RING-type E3 ubiquitin transferase RNF138; RSD-4; Rsd4; Trif; Trif gene; Trif-pending
Orthologs:
Homo sapiens (human) : RNF138 (ring finger protein 138)  HGNC  Alliance
Mus musculus (house mouse) : Rnf138 (ring finger protein 138)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rnf138 (ring finger protein 138)
Pan paniscus (bonobo/pygmy chimpanzee) : RNF138 (ring finger protein 138)
Canis lupus familiaris (dog) : RNF138 (ring finger protein 138)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rnf138 (ring finger protein 138)
Sus scrofa (pig) : RNF138 (ring finger protein 138)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01815,146,925 - 15,167,361 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01814,930,044 - 14,947,566 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41812,764,220 - 12,788,635 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11812,790,865 - 12,815,280 (+)NCBI
Celera1812,291,209 - 12,314,858 (+)NCBICelera
Cytogenetic Map18p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Rnf138
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 621485
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.