Gene: Syf2 (SYF2 pre-mRNA-splicing factor) Rattus norvegicus
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Symbol: Syf2
Name: SYF2 pre-mRNA-splicing factor
Description: Involved in positive regulation of cell population proliferation; localizes to the nucleus; biomarker of encephalitis; orthologous to human SYF2 (SYF2 pre-mRNA splicing factor); PARTICIPATES IN spliceosome pathway; INTERACTS WITH ammonium chloride; bisphenol A; (-)-epigallocatechin 3-gallate (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: GCIP-interacting protein p29; Gcipip; P29; pre-mRNA-splicing factor SYF2; SYF2 homolog, RNA splicing factor; SYF2 homolog, RNA splicing factor (S. cerevisiae)
Orthologs:
Homo sapiens (human) : SYF2 (SYF2 pre-mRNA splicing factor)  HGNC  Alliance
Mus musculus (house mouse) : Syf2 (SYF2 homolog, RNA splicing factor (S. cerevisiae))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Syf2 (SYF2 pre-mRNA splicing factor)
Pan paniscus (bonobo/pygmy chimpanzee) : SYF2 (SYF2 pre-mRNA splicing factor)
Canis lupus familiaris (dog) : SYF2 (SYF2 pre-mRNA splicing factor)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Syf2 (SYF2 pre-mRNA splicing factor)
Sus scrofa (pig) : SYF2 (SYF2 pre-mRNA splicing factor)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05153,269,638 - 153,277,562 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.05157,038,601 - 157,046,526 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45153,707,654 - 153,715,581 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15153,717,692 - 153,725,619 (+)NCBI
Celera5145,568,681 - 145,576,494 (+)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Syf2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 621592
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.