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Gene: Rabggta (Rab geranylgeranyltransferase subunit alpha) Rattus norvegicus
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Symbol: Rabggta
Name: Rab geranylgeranyltransferase subunit alpha
Description: Exhibits Rab GTPase binding activity and Rab geranylgeranyltransferase activity. Involved in protein geranylgeranylation. Localizes to Rab-protein geranylgeranyltransferase complex. Orthologous to human RABGGTA (Rab geranylgeranyltransferase subunit alpha); INTERACTS WITH 2,4-dinitrotoluene; 2,6-dinitrotoluene; 4-amino-2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: geranylgeranyl transferase type II subunit alpha; geranylgeranyl transferase type-2 subunit alpha; rab geranyl-geranyltransferase subunit alpha; Rab geranylgeranyl transferase, a subunit; Rab geranylgeranyltransferase alpha; Rab geranylgeranyltransferase, alpha subunit; rab GG transferase alpha; rab GGTase alpha
Orthologs:
Homo sapiens (human) : RABGGTA (Rab geranylgeranyltransferase subunit alpha)  HGNC  Alliance
Mus musculus (house mouse) : Rabggta (Rab geranylgeranyl transferase, a subunit)  MGI  Alliance
Pan paniscus (bonobo/pygmy chimpanzee) : RABGGTA (Rab geranylgeranyltransferase subunit alpha)
Canis lupus familiaris (dog) : RABGGTA (Rab geranylgeranyltransferase subunit alpha)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rabggta (Rab geranylgeranyltransferase subunit alpha)
Sus scrofa (pig) : RABGGTA (Rab geranylgeranyltransferase subunit alpha)
Chlorocebus sabaeus (African green monkey) : RABGGTA (Rab geranylgeranyltransferase subunit alpha)
Heterocephalus glaber (naked mole-rat) : Rabggta (Rab geranylgeranyltransferase subunit alpha)
more info ...
Related Pseudogenes: Rabggta-ps1  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01534,393,419 - 34,400,466 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1534,393,233 - 34,400,449 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01538,283,389 - 38,290,429 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41533,862,275 - 33,868,619 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11533,877,146 - 33,883,992 (-)NCBI
Celera1528,783,370 - 28,789,714 (-)NCBICelera
Cytogenetic Map15p13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Rabggta
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 621697
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.