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Gene: Ptf1a (pancreas associated transcription factor 1a) Rattus norvegicus
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Symbol: Ptf1a
Name: pancreas associated transcription factor 1a
Description: Exhibits RNA polymerase II distal enhancer sequence-specific DNA binding activity. Involved in exocrine pancreas development and regulation of transcription, DNA-templated. Localizes to the cytoplasm; nucleus; and transcription factor complex. Human ortholog(s) of this gene implicated in pancreatic agenesis. Orthologous to human PTF1A (pancreas associated transcription factor 1a); INTERACTS WITH ammonium chloride; bisphenol A; sodium dichromate.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: bHLH transcription factor p48; p48 DNA-binding subunit of transcription factor PTF1; pancreas specific transcription factor, 1a; pancreas transcription factor 1 subunit alpha; pancreas-specific transcription factor 1a; PTF1-p48
Orthologs:
Homo sapiens (human) : PTF1A (pancreas associated transcription factor 1a)  HGNC  Alliance
Mus musculus (house mouse) : Ptf1a (pancreas specific transcription factor, 1a)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ptf1a (pancreas associated transcription factor 1a)
Pan paniscus (bonobo/pygmy chimpanzee) : PTF1A (pancreas associated transcription factor 1a)
Canis lupus familiaris (dog) : PTF1A (pancreas associated transcription factor 1a)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ptf1a (pancreas associated transcription factor 1a)
Sus scrofa (pig) : PTF1A (pancreas associated transcription factor 1a)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01786,199,623 - 86,201,477 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01787,911,175 - 87,913,029 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41793,494,689 - 93,496,543 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11793,505,521 - 93,507,376 (+)NCBI
Celera1781,323,632 - 81,325,486 (+)NCBICelera
Cytogenetic Map17q12.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Ptf1a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 621709
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.