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Gene: Pip4k2c (phosphatidylinositol-5-phosphate 4-kinase type 2 gamma) Rattus norvegicus
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Symbol: Pip4k2c
Name: phosphatidylinositol-5-phosphate 4-kinase type 2 gamma
Description: Exhibits 1-phosphatidylinositol-4-phosphate 5-kinase activity. Predicted to be involved in positive regulation of autophagosome assembly. Localizes to the endoplasmic reticulum. Orthologous to human PIP4K2C (phosphatidylinositol-5-phosphate 4-kinase type 2 gamma); PARTICIPATES IN inositol phosphate metabolic pathway; phosphatidylinositol 3-kinase signaling pathway; INTERACTS WITH 2,4-dinitrotoluene; acrylamide; ammonium chloride.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: phosphatidylinositol 5-phosphate 4-kinase type II gamma; phosphatidylinositol 5-phosphate 4-kinase type-2 gamma; phosphatidylinositol-4-phosphate 5-kinase, type II, gamma; phosphatidylinositol-5-phosphate 4-kinase type-2 gamma; phosphatidylinositol-5-phosphate 4-kinase, type II, gamma; PI(5)P 4-kinase type II gamma; PIP4KII-gamma; Pip5k2c
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: spans an assembly gap
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0770,483,948 - 70,498,995 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0770,661,192 - 70,676,538 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4767,151,468 - 67,166,564 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1767,172,688 - 67,187,294 (-)NCBI
Celera760,161,604 - 60,176,643 (-)NCBICelera
Cytogenetic Map7q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Pip4k2c
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 621711
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.